Clinical Assistant Professor
Department: PHHP-COM BIOSTATISTICS
Business Phone: (352) 294-5459
Business Email: firstname.lastname@example.org
About Jonathan Fischer
Jonathan Fischer is a Clinical Assistant Professor in the Department of Biostatistics. He has experience teaching undergraduate and graduate students in probability, statistics, data science, and computational biology. His research interests generally lie in the development and application of methods for use with high-throughput sequencing data, particularly the transcriptomic variety. Dr. Fischer earned his PhD in Statistics in 2018 from the University of California, Berkeley, and received a BS in Physics and Mathematics from the College of William & Mary in 2013.
PHC6052 Introduction to Biostatistical Methods
PHC6946 Public Health Internship
PHC6088 Statistical Analysis of Genetic Data
PHC6050 Statistical Methods for Health Sciences Research I
PHC6601 Seminar in Contemporary Public Health Issues
PHC6941 MPH Applied Practice Experience
PHC6937 Special Topics in Public Health
PHC6089 Public Health Computing
STA6177 Applied Survival Analysis
PHC6051 Biostatistical Methods II
PHC6064 Survey of Advanced Biostatistical Methods for the Health Sciences
Open Researcher and Contributor ID (ORCID)
RNA-controlled nucleocytoplasmic shuttling of mRNA decay factors regulates mRNA synthesis and a novel mRNA decay pathway
Nature Communications. 13(1) [DOI] 10.1038/s41467-022-34417-z. [PMID] 36418294.
Robust and annotation-free analysis of alternative splicing across diverse cell types in mice
eLife. 11 [DOI] 10.7554/elife.73520.
Likelihood-based deconvolution of bulk gene expression data using single-cell references.
Genome research. 31(10):1794-1806 [DOI] 10.1101/gr.272344.120. [PMID] 34301624.
Numerous Post-translational Modifications of RNA Polymerase II Subunit Rpb4/7 Link Transcription to Post-transcriptional Mechanisms.
Cell reports. 34(2) [DOI] 10.1016/j.celrep.2020.108578. [PMID] 33440147.
The yeast exoribonuclease Xrn1 and associated factors modulate RNA polymerase II processivity in 5′ and 3′ gene regions.
The Journal of biological chemistry. 295(33):11435-11454 [DOI] 10.1074/jbc.RA120.013426. [PMID] 32518159.
Three-way clustering of multi-tissue multi-individual gene expression data using semi-nonnegative tensor decomposition
The Annals of Applied Statistics. 13(2):1103-1127 [DOI] 10.1214/18-aoas1228. [PMID] 33381253.
OPERATOR NORM INEQUALITIES BETWEEN TENSOR UNFOLDINGS ON THE PARTITION LATTICE.
Linear algebra and its applications. 520:44-66 [DOI] 10.1016/j.laa.2017.01.017. [PMID] 28286347.
Ground state of graphene heterostructures in the presence of random charged impurities
Physical Review B. 90(3) [DOI] 10.1103/physrevb.90.035406.
PhD, Statistics2018 · University of California, Berkeley
BS, Physics and Mathematics2013 · The College of William & Mary
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